| Expression 1. Hybrid Methods Spectral Clustering Gene Ontology Terms to Group Genes by Function Dynamic De-Novo Prediction of microRNAs Associated with Cell Conditions: A Search Pruned by Expression 2. Time Patterns Clustering Gene Expression Series with Prior Knowledge A Linear Time Bielustering Algorithm for Time Series Gene Expression Data Time-Window Analysis of Developmental Gene Expression Data with Multiple Genetic Backgrounds Phylogeny 1. Quartets A Lookahead Branch-and-Bound Algorithm for the Maximum Quartet Consistency Problem Computing the Quartet Distance Between Trees of Arbitrary Degree 2. Tree Reconciliation Using Semi-definite Programming to Enhance Supertree Resolvab An Efficient Reduction from Constrained to Unconstrained Maximum Agreement Subtree 3. Clades and Haplotypes Pattern Identification in Biogeography On the Complexity of Several Haplotyping Problems A Hidden Markov Technique for Haplotype Reconstruction Algorithms for Imperfect Phylogeny Haplotyping (IPPH) with a Single Homoplasy or Recombination Event Networks A Faster Algorithm for Detecting Network Motifs Reaction Motifs in Metabolic Networks Reconstructing Metabolic Networks Using Interval Analysis Genome Rearrangements 1.Trasposition Model A 1.375-Approximation Algorithm for Sorting by Transpositions …… Sequences Structure Author Index |
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